Software

geovar

GeoVar is a software tool for coarse-grained visualization of multi-population patterns of allele sharing in python. If you use this package please cite this paper

qtl-power

qtl-power is a python package that allows for easy calculation and plotting of power for genome-wide association studies (GWAS) under a number of experimental settings. Some features of this package are more experimental (e.g. burden-testing power estimation).

Olink QC Pipeline

A small workflow I wrote while in industry to support automated QC of Olink targetted proteomics data for downstream applications.