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cointf
cointf

Guide

  • Model and likelihood
  • User guide
  • Using cointf from R
  • Numerics, accuracy and speed
  • Maximum-likelihood estimation of \(\nu\) and \(p\)

API reference

  • Python API
    • cointf.fastlik: single-meiosis likelihood
    • cointf.quartet: phase-unknown likelihood
    • cointf.chebyshev: approximate kernel
    • cointf.simintf: simulation
    • cointf.naive: reference implementations
  • R API
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