Publications¶
* indicates equal contribution
Preprints¶
Margaret C. Steiner, Daniel P. Rice, Arjun Biddanda, Mariadaria K. Ianni-Ravn, Christian Porras, John Novembre. Study design and the sampling of deleterious rare variants in biobank-scale datasets. bioRxiv | Full Text
DongAhn Yoo, Arang Rhie, …, Arjun Biddanda , …, Adam M. Phillippy, Evan E. Eichler. Complete sequencing of ape genomes. bioRxiv | Full Text
Peer-Reviewed¶
2024¶
Dylan J. Taylor, Surya B. Chhetri, Michael G. Tassia, Arjun Biddanda, Stephanie M. Yan, Genevieve L. Wojcik, Alexis Battle, Rajiv C. McCoy. (2024) Sources of gene expression variation in a globally diverse human cohort. Nature | Full Text | Software
Kateryna D. Makova, Brandon D. Pickett, …, Arjun Biddanda, …, Evan E. Eichler, Adam M. Phillippy. (2024). The Complete Sequence and Comparative Analysis of Ape Sex Chromosomes. Nature | Full Text
Arjun Biddanda*, Esha Bandyopadhyay*, Constanza de la Fuente Castro*, David Witonsky, … , Niraj Rai, Maanasa Raghavan. (2024) Distinct positions of genetic and oral histories - Perspectives from India. HGG Advances | Full Text
2023¶
Esha Joshi, Arjun Biddanda, Jumi Popoola, … , Abasi Ene-Obong, Colm O’Dushlaine. (2023) Whole-genome sequencing across 449 samples spanning 47 ethnolinguistic groups provides insights into genetic diversity in Nigeria. Cell Genomics | Full Text
M. Elise Lauterbur, Maria Izabel A. Cavassim, …, Arjun Biddanda , …, Peter L. Ralph, Daniel R. Schrider, Ilan Gronau. (2023) Expanding the stdpopsim species catalog, and lessons learned for realistic genome simulations. | Full Text | Software
Brian C Zhang, Arjun Biddanda, Árni F Gunnarsson, Fergus Cooper, Pier Francesco Palamara. (2023) Biobank-scale inference of ancestral recombination graphs enables genealogy-based mixed model association of complex traits. Nature Genetics | Full Text | Software
2022¶
Charles Washington III, Matthew Dapas, Arjun Biddanda, Kevin M Magnaye, … , Christopher G McKennan, Carole Ober. (2022) African-specific alleles modify risk for asthma at the 17q12-q21 locus in African Americans Genome Medicine | Full Text
Arjun Biddanda, Matthias Steinrücken, John Novembre. (2022) Properties of Two-Locus Genealogies and Linkage Disequilibrium in Temporally Structured Samples. Genetics | Full Text | Software
2020¶
Arjun Biddanda, Daniel P Rice, John Novembre. (2020). Geographic patterns of human allele frequency variation - a variant-centric perspective. eLife | Full Text | Software
2018¶
Charleston W K Chiang, Joseph H Marcus, Carlo Sidore, Arjun Biddanda, Hussein Al-Asadi, Magdalena Zoledziewska, Maristella Pitzalis, Fabio Busonero, Andrea Maschio, Giorgio Pistis, Maristella Steri, Andrea Angius, Kirk E Lohmueller, Gonçalo R Abecasis, David Schlessinger, Francesco Cucca, John Novembre. (2018) Genomic history of the Sardinian population. Nature Genetics | Full Text
Peter de Barros Damgaard, Rui Martiniano, Jack Kamm, Jose Victor Moreno-Mayar, …, Arjun Biddanda, …, Richard Durbin, Eske Willerslev. (2018) The first horse herders and the impact of early Bronze Age steppe expansions into Asia. Science | Full Text
2016¶
Yedael Y. Waldman, Arjun Biddanda, Maya Dubrovsky, Christopher L. Campbell, Carole Oddoux, Eitan Friedman, Gil Atzmon, Eran Halperin, Harry Ostrer, Alon Keinan. (2016) The genetic history of Cochin Jews from India. Human Genetics | Full Text
Yedael Y. Waldman*, Arjun Biddanda*, Natalie R. Davidson, Paul Billing-Ross, Maya Dubrovsky, Christopher L. Campbell, Carole Oddoux, Eitan Friedman, Gil Atzmon, Eran Halperin, Harry Ostrer, Alon Keinan. (2016) The genetics of Bene Israel from India Reveals Both Substantial Jewish and Indian Ancestry. Plos One | Full Text
2015¶
Feng Gao*, Diana Chang*, Arjun Biddanda*, Li Ma, Yingjie Guo, Zilu Zhou, Alon Keinan. (2015) XWAS - A Software Toolset for Genetic Data Analysis and Association Studies of the X Chromosome. Journal of Heredity | Full Text | Software
Technical Reports¶
Arjun Biddanda, Karen Perez de Arce, … , Abasi Ene-Obong, Jumi Popoola, Colm O’Dushlaine, Peter Fekkes. (2023) A survey of proteomic variation across two ethnic groups in Nigeria and its relationship to obesity risk. bioRxiv | Full Text | Software